Catherine Mooney

Biography

Research Interests:

• Bioinformatics
• Computational Biology
• machine learning

General

Name and Title: 

Catherine Mooney

Position: 

Post Doctoral Researcher

Supervisor: 

Gianluca Pollastri

Research Group: 

AmMBio

Research Project: 

Protein Structure Prediction

Email: 

Personal Website: 

http://gruyere.ucd.ie/~catherine/

• Publications

Publications

C. Mooney and G. Pollastri (2009) "Beyond the Twilight Zone: Automated prediction of structural properties of proteins by recursive neural networks and remote homology information" Proteins: Structure, Function and Bioinformatics, 77(1)181-190
I. Walsh, A. J. M. Martin, C. Mooney, E. Rubagotti, A. Vullo and G. Pollastri (2009) "Ab initio and homology based prediction of protein domains by recursive neural networks" BMC Bioinformatics, 10:195
I. Walsh, D Baù, A. J. M. Martin, C. Mooney, A. Vullo and G. Pollastri (2009) "Ab initio and template-based prediction of multi-class distance maps by two-dimensional recursive neural networks" BMC Structural Biology, 9:5 [abstract] [pdf]
G. Pollastri, A.J.M. Martin, C. Mooney and A. Vullo(2007) "Accurate prediction of protein secondary structure and solvent accessibility by consensus combiners of sequence and structure information" BMC Bioinformatics, 8:201 [abstract] [pdf]
D. Baù, A.J.M. Martin, C. Mooney, A. Vullo, I. Walsh, G. Pollastri (2006) "Distill: A suite of web servers for the prediction of one-, two- and three-dimensional structural features of proteins" BMC Bioinformatics, 7:402 [abstract] [pdf]
C. Mooney, A. Vullo, G. Pollastri (2006) "Protein Structural Motif Prediction in Multidimensional Phi-Psi Space leads to improved Secondary Structure Prediction" Journal of Computational Biology, 13(8)1489-1502 [abstract] [pdf]
C. Mooney, A. Vullo, G. Pollastri (2006) "Protein Backbone Angle Prediction in Multidimensional Phi-Psi Space" UCD CSI Technical Report 2006-1 [pdf]